Anurag Priyam

Results 67 issues of Anurag Priyam

Doesn't work despite c466156ca469d0f4d20ac21c46155f9d7b89e0ba ```bash FASTA file to format: /passenger/yannick/sequenceserver/databases/query sadf copy.fa FASTA type: nucleotide Proceed? [y/n] (Default: y): y Enter a database title or will use 'query sadf copy':...

bug
hacktoberfest

Capybara tests fail if geckodriver is not installed. It could be nice if they were simply not run, like treated as pending, if geckodriver is not installed or other dependencies...

- [x] Colour based on HSP's evalue (#265) - [ ] Draw overlapping HSPs on the next line (increase y), in increasing order of evalue. Currently, they are drawn on...

feature
refinement

Sequence type notifications are set to hide after five seconds or if the user clicks somewhere on the page. I think the mixed sequence type notification (shown below) should instead...

UI
hacktoberfest
good first issue

If instead of a directory containing fasta file, users provide path to a fasta file during setup or to -d option, automatically use dirname as database directory.

hacktoberfest

Through the config file and through the command-line interface. e.g., ``` sequenceserver --database_dir /db1,/db2,/db3 sequenceserver -d /db1 -d /db2 ``` This came up on the mailing list: https://groups.google.com/d/msg/sequenceserver/7qxsNTmOI3A/WOS2yGaRAQAJ

hacktoberfest

Maybe also remove 'U' if it is the last sequence. See: https://groups.google.com/g/sequenceserver/c/r6e3nmQ2Lnc/m/xH-Pj9rPCAAJ

We have 5709 in sequenceserver.min.css. Just learnt this through codeclimate bot in PR #496. I doubt splitting the CSS for search form and results into two files will help, as...

help wanted
build

SequenceServer shows private IP and URL of an EC2 instance on startup. I wonder if it is possible for it to be more accurate here.

hacktoberfest
good first issue

Carry over from #92.

feature
hacktoberfest
good first issue