Hong Ge

Integration with Turing and NestedSamplers

19

NestedSamplers is an independent sampler library at the moment and lacks an interface for models specified by the domain-specific language (DSL) in [Turing](https://github.com/TuringLang/Turing.jl). However, since NestedSampler supports the [`AbstractMCMC` ](https://github.com/TuringLang/AbstractMCMC.jl)...

We currently have options to allow users to specify constraints for MAP/MLE optimisation-based learning. https://github.com/TuringLang/docs/pull/470 It would be interesting to also allow users to specify constraints for MCMC sampling, e.g.,...

Let's also test the `AutoTapir(false)` (false disables safe / debug mode) in Turing's autodiff test suite.

See [continuous-benchmark](https://github.com/marketplace/actions/continuous-benchmark) and Lux's [output](https://lux.csail.mit.edu/benchmarks/) as a demo.

The following example errors. It seems the issue is from upper stream packages instead of `MCMCChains`. Note that the `corner` plot works fine when the number of variables is smaller...

Add Tapir to Bijectors tests.

2

Let's add Tapir to the Bijectors tests. Related: https://github.com/TuringLang/AdvancedVI.jl/issues/63

Add Bayes SDE notebook

1

Replacing #445

We introduced the `TypeWrap` trick in https://github.com/TuringLang/DynamicPPL.jl/pull/597 for type stability. I find the name difficult to parse since `TypeWrap` does not hint at its purpose. Given that this trick is...