[Bug?]: Missing package: typescript@patch:typescript@npm

[uchar]

Self-service

• [ ] I'd be willing to implement a fix

Describe the bug

a very simple packge.json with

...
  "scripts": {
    "build": "tsc"
  },
 "dependencies": {
    "@types/node": "22.5.2",
    "tslib": "2.7.0",
    "typescript": "5.5.4"
  },
"packageManager": "[email protected]"
....

and a dockerfile

FROM node:20-alpine AS dependencies
RUN corepack enable
WORKDIR /app
COPY package.json ./
COPY yarn.lock ./
RUN yarn --immutable

FROM node:20-alpine AS builder
RUN corepack enable
WORKDIR /app
COPY --from=dependencies /app/package.json ./
COPY --from=dependencies /app/.pnp.cjs ./
COPY --from=dependencies /app/.yarn ./.yarn
COPY --from=dependencies /app/yarn.lock ./
COPY ./src ./src
RUN yarn build


FROM node:20-alpine AS runner
RUN corepack enable
WORKDIR /app
COPY --from=builder /app/build ./
COPY --from=dependencies /app/.pnp.cjs ./
COPY --from=dependencies /app/.yarn ./.yarn
ENTRYPOINT ["node", "src/testCode.js"]

fails with error

 > [builder 9/9] RUN yarn build:
1.157 ! Corepack is about to download https://repo.yarnpkg.com/4.4.1/packages/yarnpkg-cli/bin/yarn.js
3.298 /app/.pnp.cjs:5676
3.298     throw firstError;
3.298     ^
3.298
3.298 Error: Required package missing from disk. If you keep your packages inside your repository then restarting the Node process may be enough. Otherwise, try to run an install first.
3.298
3.298 Missing package: typescript@patch:typescript@npm%3A5.5.4#optional!builtin<compat/typescript>::version=5.5.4&hash=379a07
3.298 Expected package location: /root/.yarn/berry/cache/typescript-patch-fe43cd9db9-10c0.zip/node_modules/typescript/
3.298
3.298     at require$$0.Module._resolveFilename (/app/.pnp.cjs:5675:13)
3.298     at Module._load (node:internal/modules/cjs/loader:1051:27)
3.298     at require$$0.Module._load (/app/.pnp.cjs:5566:31)
3.298     at Function.executeUserEntryPoint [as runMain] (node:internal/modules/run_main:174:12)
3.298     at node:internal/main/run_main_module:28:49

yarn build outside docker works fine !

To reproduce

Clone https://github.com/uchar/yarnbugs/tree/multistage_typescript_patch_error move to branch multistage_typescript_patch_error Then run

yarn
docker build -t yarn_bug .

you will see the error

4.967 Error: Required package missing from disk. If you keep your packages inside your repository then restarting the Node process may be enough. Otherwise, try to run an install first.
4.967
4.967 Missing package: typescript@patch:typescript

Environment

System:
    OS: Linux 5.15 Alpine Linux
    CPU: (16) x64 AMD Ryzen 7 5800H with Radeon Graphics
    Binaries:
    Node: 20.17.0 - /tmp/xfs-19d7b165/node
    Yarn: 4.4.1 - /tmp/xfs-19d7b165/yarn
    npm: 10.8.2 - /usr/local/bin/npm

Additional context

No response