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hemato_swne_pseudotime_plot fail to function

Open georgewu1999 opened this issue 3 years ago • 0 comments

In reproducing the figure from the script:

pseudotime <- cds$Pseudotime; names(pseudotime) <- colnames(cds@reducedDimS);

pdf("hemato_swne_pseudotime_plot.pdf", width = 6, height = 5) FeaturePlotSWNE(swne.embedding, pseudotime, alpha.plot = 0.4, label.size = 3.5, pt.size = 1.5) Error in quantile.default(feature.scores, probs = quantiles) : missing values and NaN's not allowed if 'na.rm' is FALSE

While other parts of the scripts worked well, the function failed. Is it possibly due to some bugs in the script? Thanks.

georgewu1999 avatar May 31 '21 15:05 georgewu1999