install test fail

[homopolymer]

Hi, I ran ./igrec.py --test to verify the installation, but failed and got the following messages.

==== Low Abundant Clusters Remover finished [Errno 39] Directory not empty: 'igrec_test/dense_sgraph_finder' Traceback (most recent call last): File "./igrec.py", line 956, in main RemoveAuxFiles(params) File "./igrec.py", line 906, in RemoveAuxFiles shutil.rmtree(params.io.dsf_output) File "/home/fzeng/anaconda/lib/python2.7/shutil.py", line 256, in rmtree onerror(os.rmdir, path, sys.exc_info()) File "/home/fzeng/anaconda/lib/python2.7/shutil.py", line 254, in rmtree os.rmdir(path) OSError: [Errno 39] Directory not empty: 'igrec_test/dense_sgraph_finder'

ERROR: Exception caught.

In case you have troubles running IgReC, you can write to [email protected]. Please provide us with ig_repertoire_constructor.log file from the output directory. [Errno 39] Directory not empty: 'igrec_test/dense_sgraph_finder'

[yana-safonova]

Hi!

Thank you for your interest in IgRepertoireConstructor!

This failure looks like troubles with permission. Can you make sure that you have permission to remove directories in your working directory?

Could you please also try the following command? ./igrec.py --test --debug Such command keeps all auxiliary files and directories in igrec_test. If the reason is in permission restriction, it should help to finish launch.