Xu Zou

KP.1.1.1+Orf1a:P3359L,S:D80Y,Orf3a:T229I(27 seqs, 2 countries)

1

KP.1.1.1+C10341T, G21800T, C26078T(Orf1a:P3359L,S:D80Y,Orf3a:T229I) GISAID query: G21800T, A22108C, G17334T No. of seqs: 24(USA 23 UK 1) First: EPI_ISL_19145490,USA, 2024-3-19 Latest: EPI_ISL_19260217, USA, 2024-6-26 [usher](https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice173_genome_test_154e8_201b90.json?label=id:node_5485885) 

KP.3.1.1+C5826T(Orf1a:T1854I)+C8247T, G22104T(Orf1a:S2661F, S:G181V) GISAID query: C5826T, C8247T, G22104T No. of seqs: 16(France 1 Germany 2 Luxembourg 2 Spain 1 Sweden 1 USA 8(2 from Portugal)) First:EPI_ISL_19195753, USA from Portugal, 2024-6-2...

KP.3.1.4+Orf7a:T120I, Orf9b:S50L, N:E136D(53 seqs, 7 countries)

7

KP.3.1.4+C27752T(Orf7a:T120I)+C28432T,G28681T(Orf9b:S50L, N:E136D) GISAID query: C27752T,C28432T,G28681T, C18490T No. of seqs: 14(USA 1 Ireland 13) First: EPI_ISL_19195334, 2024-5-31, Ireland Latest: EPI_ISL_19222386, 2024-6-22, Ireland [usher](https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice1_genome_test_5a536_2182b0.json?label=id:node_5453650) 

LB.1+S:Q677H(127 seqs, >10 countries)

7

LB.1+G23593T(S:Q677H) GISAID query: G23593T, del21653, G22111T,-18131,-4784,-3724 No. of seqs: 6(Spain 1 USA 1 UK 1 Canada 3) First: EPI_ISL_19230847, Canada, 2024-6-18 Latest: EPI_ISL_19274476, Spain, 2024-7-15 [usher](https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice193_genome_test_1a04a_db2390.json?label=id:node_5662661) 

KP.2.2+S:T572I (35 seqs, 7 countries) and its sublineage with S:K182R,S:A846V (25)

9

KP.2.2+C23277T(S:T572I) GISAID query: C23277T, A25359G, T21737C, -A2745G, -24364,-28468,-25455,-29410 No. of seqs: 12( USA 3(from China) UK 9) First: EPI_ISL_19161980, UK, 2024-5-12 Latest: EPI_ISL_19206011, USA from China, 2024-6-7 There already exists...

MH.1+Orf1a:H1108Y+S:P85S (44 seqs, 8 countries)

4

MH.1+C10183T+C25413T+A178T+C5770T+C3587T(Orf1a:H1108Y)+C21815T(S:P85S) GISAID query: C21815T, C3587T, C25413T No. of seqs: 19(France 1 Israel 12 China 1 USA 5(2 from Netherlands)) First: EPI_ISL_19206005, USA from Netherlands , 2024-6-5 Latest: EPI_ISL_19308803, Israel, 2024-7-25...

KP.1.1.5+C8619T(Orf1a:A2785V)+T18547C,C13335T(Orf1a:A4357V)+C15720T, G25166A, G28378T(S:E1202K, Orf9b:R32L) GISAID query: C8619T, G25166A, G28378T No. of seqs: 6(USA, 2 from UK, 2 from Italy) First: EPI_ISL_19273669, USA from Italy, 2024-7-5 Latest: EPI_ISL_19285348, USA, 2024-7-11 [usher](https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice162_genome_test_971_1b2f20.json?label=id:node_5481078)...

JN.1.50+Orf9b:R25K(10 seqs, 7 countries)

1

JN.1.50+G28357A(Orf9b:R25K) GISAID query: G28357A,C9298T,C18894T No. of seqs: 7(USA 3(2 from Mexico), Denmark 1 Spain 1 Sweden 2) First: EPI_ISL_19151418, 2024-5-7, Sweden Latest: EPI_ISL_19279987, 2024-7-9, USA from Mexico [usher](https://nextstrain.org/fetch/genome-test.gi.ucsc.edu/trash/ct/subtreeAuspice142_genome_test_971_1b2eb0.json?label=id:node_5438117) 

KP.1.1.3+S:478Q(13 seqs, 5 countries)

4

This 2-nuc S:478Q is emerging, too. KP.1.1.3+C26625T+T9070C, C10138T,A22994C(S:K478Q) GISAID query: C4999T, C26625T, A22994C No. of seqs: 8(Switzerland 5 USA 1 Canada 1 France 1) First:EPI_ISL_19255585, Switzerland, 2024-6-2 Latest: EPI_ISL_19294007, Canada,...

KP.2.3+S:G181V(25 seqs, 8 countries)

5

KP.2.3(with 31del)+C28714T+G22104T(S:G181V) GISAID query: G22104T, G25593T, C28714T No. of seqs: 7(Canada 1 USA 6(1 from France 1 from Portugal) Worth noticing the 6 USA seqs are from 6 different states....