DiTing
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ERROR sequence/io/sequence_lib.cpp : 70 - PE library number of reads is odd: 49891647!'
Dear
When I run Diting, /home/lbhuang/miniconda3/envs/diting-env/bin/diting.py -r /home/lbhuang/Moore/data/Metagenomics_test/ -o /home/lbhuang/Moore/results_test/Diting_result/
I get this erorr:
2022-09-23 20:27:50 - MEGAHIT v1.2.9 2022-09-23 20:27:50 - Using megahit_core with POPCNT and BMI2 support 2022-09-23 20:27:50 - Convert reads to binary library 2022-09-23 20:27:50 - command /home/lbhuang/miniconda3/envs/diting-env/bin/megahit_core buildlib /home/lbhuang/Moore/results_test/Diting_result/assembly_tmp/tmp/reads.lib /home/lbhuang/Moore/results_test/Diting_result/assembly_tmp/tmp/reads.lib 2022-09-23 20:31:04 - b'ERROR sequence/io/sequence_lib.cpp : 70 - PE library number of reads is odd: 49891647!' 2022-09-23 20:31:04 - b'FATAL sequence/io/sequence_lib.cpp : 72 - File(s): /home/lbhuang/Moore/data/Metagenomics_test/P21_R2.fastq.gz' 2022-09-23 20:31:04 - Error occurs, please refer to /home/lbhuang/Moore/results_test/Diting_result/assembly_tmp/log for detail 2022-09-23 20:31:04 - Command: /home/lbhuang/miniconda3/envs/diting-env/bin/megahit_core buildlib /home/lbhuang/Moore/results_test/Diting_result/assembly_tmp/tmp/reads.lib /home/lbhuang/Moore/results_test/Diting_result/assembly_tmp/tmp/reads.lib; Exit code 1
Hi,
Change P21_R2.fastq.gz to P21_2.fastq.gz.
Best, Chun-Xu