H-DenseUNet
H-DenseUNet copied to clipboard
train_2ddense.py Error during Custom Data Training
Exception in thread Thread-1:
Traceback (most recent call last):
File "/home/shanyx/anaconda3/envs/larry_keras/lib/python2.7/threading.py", line 801, in __bootstrap_inner
self.run()
File "/home/shanyx/anaconda3/envs/larry_keras/lib/python2.7/threading.py", line 754, in run
self.__target(*self.__args, **self.__kwargs)
File "Keras-2.0.8/keras/utils/data_utils.py", line 568, in data_generator_task
generator_output = next(self._generator)
File "train_2ddense.py", line 121, in generate_arrays_from_file
result_list = pool.map(load_seq_crop_data_masktumor_try, Parameter_List)
File "/home/shanyx/anaconda3/envs/larry_keras/lib/python2.7/multiprocessing/pool.py", line 253, in map
return self.map_async(func, iterable, chunksize).get()
File "/home/shanyx/anaconda3/envs/larry_keras/lib/python2.7/multiprocessing/pool.py", line 572, in get
raise self._value
ValueError: zero-size array to reduction operation minimum which has no identity
Traceback (most recent call last):
File "train_2ddense.py", line 224, in <module>
train_and_predict()
File "train_2ddense.py", line 219, in train_and_predict
workers=1, use_multiprocessing=False)
File "Keras-2.0.8/keras/legacy/interfaces.py", line 87, in wrapper
return func(*args, **kwargs)
File "Keras-2.0.8/keras/engine/training.py", line 2011, in fit_generator
generator_output = next(output_generator)
StopIteration
First, thanks for your work. This occurred when I training on my own dataset. Could you please give me some help? thx!
The problem is in the data loader part, I guess. Check if the slicing operation excels the array boundary.
Has this problem been solved?