Docker build failing at step 30

[akshat-khare]

After cloning I ran docker build -t 3dseg .. Build is failing at step 30 with following error.

Step 30/36 : RUN python3 setup.py bdist_wheel
 ---> Running in a575717e6e68
running bdist_wheel
running build
running build_py
creating build
creating build/lib.linux-x86_64-3.6
creating build/lib.linux-x86_64-3.6/spconv
copying spconv/test_utils.py -> build/lib.linux-x86_64-3.6/spconv
copying spconv/__init__.py -> build/lib.linux-x86_64-3.6/spconv
copying spconv/modules.py -> build/lib.linux-x86_64-3.6/spconv
copying spconv/pool.py -> build/lib.linux-x86_64-3.6/spconv
copying spconv/functional.py -> build/lib.linux-x86_64-3.6/spconv
copying spconv/conv.py -> build/lib.linux-x86_64-3.6/spconv
copying spconv/ops.py -> build/lib.linux-x86_64-3.6/spconv
creating build/lib.linux-x86_64-3.6/spconv/utils
copying spconv/utils/__init__.py -> build/lib.linux-x86_64-3.6/spconv/utils
running build_ext
-- The CXX compiler identification is GNU 7.5.0
-- The CUDA compiler identification is NVIDIA 10.2.89
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Detecting CUDA compiler ABI info
-- Detecting CUDA compiler ABI info - done
-- Check for working CUDA compiler: /usr/local/cuda/bin/nvcc - skipped
-- Detecting CUDA compile features
-- Detecting CUDA compile features - done
-- Looking for C++ include pthread.h
-- Looking for C++ include pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Found CUDA: /usr/local/cuda (found version "10.2")
-- Caffe2: CUDA detected: 10.2
-- Caffe2: CUDA nvcc is: /usr/local/cuda/bin/nvcc
-- Caffe2: CUDA toolkit directory: /usr/local/cuda
-- Caffe2: Header version is: 10.2
-- Found CUDNN: /usr/lib/x86_64-linux-gnu/libcudnn.so
-- Found cuDNN: v8.2.4  (include: /usr/include, library: /usr/lib/x86_64-linux-gnu/libcudnn.so)
-- Automatic GPU detection failed. Building for common architectures.
-- Autodetected CUDA architecture(s): 3.5;5.0;5.2;6.0;6.1;7.0;7.0+PTX;7.5;7.5+PTX
-- Added CUDA NVCC flags for: -gencode;arch=compute_35,code=sm_35;-gencode;arch=compute_50,code=sm_50;-gencode;arch=compute_52,code=sm_52;-gencode;arch=compute_60,code=sm_60;-gencode;arch=compute_61,code=sm_61;-gencode;arch=compute_70,code=sm_70;-gencode;arch=compute_75,code=sm_75;-gencode;arch=compute_70,code=compute_70;-gencode;arch=compute_75,code=compute_75
-- Found Torch: /usr/local/lib/python3.6/dist-packages/torch/lib/libtorch.so
CMake Error at CMakeLists.txt:28 (add_subdirectory):
  The source directory

    /spconv/third_party/pybind11

  does not contain a CMakeLists.txt file.


-- Configuring incomplete, errors occurred!
See also "/spconv/build/temp.linux-x86_64-3.6/CMakeFiles/CMakeOutput.log".
See also "/spconv/build/temp.linux-x86_64-3.6/CMakeFiles/CMakeError.log".
/spconv/build/lib.linux-x86_64-3.6
Release
Traceback (most recent call last):
  File "setup.py", line 103, in <module>
    zip_safe=False,
  File "/usr/lib/python3/dist-packages/setuptools/__init__.py", line 129, in setup
    return distutils.core.setup(**attrs)
  File "/usr/lib/python3.6/distutils/core.py", line 148, in setup
    dist.run_commands()
  File "/usr/lib/python3.6/distutils/dist.py", line 955, in run_commands
    self.run_command(cmd)
  File "/usr/lib/python3.6/distutils/dist.py", line 974, in run_command
    cmd_obj.run()
  File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 204, in run
    self.run_command('build')
  File "/usr/lib/python3.6/distutils/cmd.py", line 313, in run_command
    self.distribution.run_command(command)
  File "/usr/lib/python3.6/distutils/dist.py", line 974, in run_command
    cmd_obj.run()
  File "/usr/lib/python3.6/distutils/command/build.py", line 135, in run
    self.run_command(cmd_name)
  File "/usr/lib/python3.6/distutils/cmd.py", line 313, in run_command
    self.distribution.run_command(command)
  File "/usr/lib/python3.6/distutils/dist.py", line 974, in run_command
    cmd_obj.run()
  File "setup.py", line 39, in run
    self.build_extension(ext)
  File "setup.py", line 71, in build_extension
    subprocess.check_call(['cmake', ext.sourcedir] + cmake_args, cwd=self.build_temp, env=env)
  File "/usr/lib/python3.6/subprocess.py", line 311, in check_call
    raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['cmake', '/spconv', '-DCMAKE_LIBRARY_OUTPUT_DIRECTORY=/spconv/build/lib.linux-x86_64-3.6/spconv', '-DCMAKE_PREFIX_PATH=/usr/local/lib/python3.6/dist-packages/torch', '-DPYBIND11_PYTHON_VERSION=3.6', '-DSPCONV_BuildTests=OFF', '-DCMAKE_CUDA_FLAGS="--expt-relaxed-constexpr"', '-DCMAKE_BUILD_TYPE=Release', '-DCMAKE_CUDA_COMPILER:FILEPATH=/usr/local/cuda/bin/nvcc']' returned non-zero exit status 1.
The command '/bin/sh -c python3 setup.py bdist_wheel' returned a non-zero code: 1

Here is partial output of nvidia-smi

$ nvidia-smi
Tue Nov 30 16:51:26 2021
+-----------------------------------------------------------------------------+
| NVIDIA-SMI 460.91.03    Driver Version: 460.91.03    CUDA Version: 11.2     |
|-------------------------------+----------------------+----------------------+

Please help me build the image and run inference on it. Thanks

[akshat-khare]

It appears /spconv/third_party/pybind11 directory is empty. Executing git clone https://github.com/pybind/pybind11.git at /spconv/third_party directory and letting remaining stuff run leads to successful build. Please fix the Dockerfile accordingly if this is the problem.