Plots for gene centric ncRNA regions

[samreenzafer]

Hi. I would like to also get the plots for the gene centric noncoding ncRNA regions. I see that the default (NULL) would be used for ncRNA_pos in the STAARpipeline-Tutorial/STAARpipelineSummary_Gene_Centric_Noncoding.r script, since no value is provided.

@param ncRNA_pos positions of ncRNA genes, required for generating the Manhattan plot and Q-Q plot of the results of ncRNA genes (default=NULL).

Can you please tell me what type of data structure I should provide to this argument so that I can make the script print the respective plots? I do already have the ncRNA_sig.csv file with 10 lines, and these lines are also included in the noncoding_sig.csv summary file.