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quesition about GO

Open yaober opened this issue 2 years ago • 4 comments

Youe work is pretty impressive. Our team want to utilize your model for our task. Taking MERFISH for an instance, when we trained the model, we have no idea to design GO experiement. Could you help me with some code? Much thanks!😊

yaober avatar Jun 07 '22 13:06 yaober

You can upload the list of differentially expressed genes to the GO analysis web server (http://geneontology.org/).

lijc0804 avatar Jul 25 '22 02:07 lijc0804

UnboundLocalError: local variable 'cell_types_relabel' referenced before assignment

when we try to recurrent CCST on DLPFC, we have faced this problem, could you give me some suggestions?

yaober avatar Jul 26 '22 12:07 yaober

Thanks for your comments and we have updated data_generation_ST.py.

lijc0804 avatar Jul 26 '22 13:07 lijc0804

Thanks for your cosideration! But we have updated your new version,there are still put error:ValueError: 'c' argument has 4221 elements, which is inconsistent with 'x' and 'y' with size 4226. Could process it? My python==3.9, what is your version? image

yaober avatar Jul 26 '22 13:07 yaober