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Unknown option -d in output_reports.pl

Open dinhe878 opened this issue 3 years ago • 1 comments

Hi,

I encountered an issue

[Thu Nov 25 09:32:38 2021] Running: /services/tools/perl/5.20.1/bin/perl /services/tools/metaerg/1.2.3/bin/output_reports.pl -d /home/people/dinghe/ku_00039/people/dinghe/metaergDB/db -g metaerg_out/data/all.gff -o metaerg_out -f metaerg_out/GAGA-0336.fna 20 use File::Path qw(make_path remove_tree); Unknown option: d

It seems that there isn't an option (-d) for specifying custom database path in this perl script output_reports.pl.

Could you update the script to fix this bug?

Many thanks!

dinhe878 avatar Nov 25 '21 09:11 dinhe878

I encountered the same problem with docker.

BioGavin avatar Apr 19 '23 05:04 BioGavin