ptemcee

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Bumps [numpy](https://github.com/numpy/numpy) from 1.15.1 to 1.22.0. Release notes Sourced from numpy's releases. v1.22.0 NumPy 1.22.0 Release Notes NumPy 1.22.0 is a big release featuring the work of 153 contributors spread...

dependabot[bot]

`ptemcee/tests.py::Tests::test_inf_logprob` can fail when executing with `pytest --randomly-seed=123`.

shenganzhang

Can you post an example?

2

Would it be possible to post a working example? The old PTSampler example doesn't seem to work anymore. In particular, the Sampler object doesn't have a keyword "iterations".

kennychowdhary

Problems installing on windows

5

I've tried installing `ptemcee` on three windows computers, and I get the same error on all of them: ` Traceback (most recent call last): File "", line 1, in File...

sblunt

I have been using you code for model selection, for which I have been calculating evidence using the built-in thermodynamic integration. However I am finding that the adaptive temperature spacing...

ljschumacher

The rewritten Sampler should accept an `int` for the `betas` parameter. Indeed, `Sampler.__attrs_post_init__` indicates that it's allowed. So change the betas validator to allow ints. Whilst we're at it update...

andyfaff

andyfaff

Add vectorize option for Numpy arraywise evaluation of like/prior

3

This behaves exactly the same as the `vectorize` option from `emcee.EnsembleSampler`.

lpsinger

When decay and kappa are calculated in `_get_ladder_adjustment` in (lines 180 and 181 in `ensemble.py`), a division with integers is performed. Since `decay` is always less than 1, this results...

cdcapano

Use the new autocorr() function in emcee?

2

I've been doing some tests an the [new `autocorr()` function in emcee](https://github.com/dfm/emcee/blob/master/emcee/autocorr.py) returns times that are *much* shorter than the ones estimated by the `autocorr_integrated_time()` function currently in this package....

Gabriel-p