mokapot
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Supervised learning step
Added supervised step in model.py
in fit()
method before direction is chosen and made corresponding init changes to Model
and PercolatorModel
class and brew()
method in brew.py
. Also made necessary changes in _find_hyperparameters()
method to properly utilize the supervised step added in fit()
. Other minor changes in model.py
include: changing estimator's refit parameter to true, fixing logger info in _get_starting_labels()
, etc...
Codecov Report
Merging #57 (a564c67) into master (91e6f96) will increase coverage by
0.53%
. The diff coverage is95.45%
.
@@ Coverage Diff @@
## master #57 +/- ##
==========================================
+ Coverage 83.09% 83.63% +0.53%
==========================================
Files 18 18
Lines 1538 1570 +32
==========================================
+ Hits 1278 1313 +35
+ Misses 260 257 -3
Impacted Files | Coverage Δ | |
---|---|---|
mokapot/model.py | 86.57% <95.45%> (+2.73%) |
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mokapot/config.py | 91.30% <0.00%> (+0.19%) |
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mokapot/mokapot.py | 85.36% <0.00%> (+0.36%) |
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mokapot/brew.py | 89.42% <0.00%> (+1.25%) |
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