MultiVelo icon indicating copy to clipboard operation
MultiVelo copied to clipboard

SHARE-seq mouse skin velocyto output

Open chelseabright96 opened this issue 1 year ago • 2 comments

Good day, I am interested to run MultiVelo on the SHARE-seq mouse skin dataset and compare the results with another model. I would like to request the unspliced and spliced count matrices that you used for your experiments if you still have them available. If not, It would be a huge help if you could share with me the input files you used for velocyto and the command for running velocyto. I am new to the tool and would appreciate any help as I am not sure about what files to use from the genome omnibus website.

Thanks in advance for your help!

chelseabright96 avatar Sep 10 '23 06:09 chelseabright96

I can share the Velocyto loom file through email if you share the address with me.

danielee0707 avatar Sep 11 '23 03:09 danielee0707

Thank you! I have sent you an email

chelseabright96 avatar Sep 11 '23 05:09 chelseabright96