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No documentation for cd-hit-auxtools and no cdhit-cluster-consensus available
Hi, there is http://weizhong-lab.ucsd.edu/cd-hit/wiki/doku.php?id=cd-hit-auxtools-manual but it seems there is no documentation like this in current cd-hit tree (4.6.5). Further, there used to be http://weizhong-lab.ucsd.edu/softwares/cd-hit-454/cdhit-cluster-consensus-2013-03-27.tgz but I don't see it in current cd-hit tree. Does it really export consensus sequence of each cluster? How does it work with INDELs? Does it use majority vote or something else? Thank you