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error after making max-seq 1000000
Hi,
I ran "git clone https://github.com/weizhongli/cdhit.git"
Then, changed the directory to cdhit.
Then ran "make MAX_SEQ=10000000"
I got
"g++ -fopenmp -DWITH_ZLIB -O2 -DMAX_SEQ=10000000 cdhit-common.c++ -c
g++ -fopenmp -DWITH_ZLIB -O2 -DMAX_SEQ=10000000 cdhit.o cdhit-common.o cdhit-utility.o -lz -o cd-hit
g++ -fopenmp -DWITH_ZLIB -O2 -DMAX_SEQ=10000000 cdhit-est.o cdhit-common.o cdhit-utility.o -lz -o cd-hit-est
g++ -fopenmp -DWITH_ZLIB -O2 -DMAX_SEQ=10000000 cdhit-2d.o cdhit-common.o cdhit-utility.o -lz -o cd-hit-2d
g++ -fopenmp -DWITH_ZLIB -O2 -DMAX_SEQ=10000000 cdhit-est-2d.o cdhit-common.o cdhit-utility.o -lz -o cd-hit-est-2d
g++ -fopenmp -DWITH_ZLIB -O2 -DMAX_SEQ=10000000 cdhit-div.c++ -c
g++ -fopenmp -DWITH_ZLIB -O2 -DMAX_SEQ=10000000 cdhit-div.o cdhit-common.o cdhit-utility.o -lz -o cd-hit-div
g++ -fopenmp -DWITH_ZLIB -O2 -DMAX_SEQ=10000000 cdhit-454.c++ -c
But after running the cd-hit-est, I got the same error (Some seqs are too long, please rebuild the program with make parameter MAX_SEQ=new-maximum-length (e.g. make MAX_SEQ=10000000)
.
Also I edited the file manually, but also still got the same error.
Hello!Have you change MAX_SEQ to 10000000 successfully? I have the same problem,may i ask the solve steps?