nanoQC

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nanoPlot and nanoQC TypeError

3

I'm trying to use nanoPlot and/or nanoQC but getting the following error (both using pip and conda for installation). Can you help me? ``` Traceback (most recent call last): File...

DaniPaulo

nanoQC was not making html output report

1

I used 'pip install nanoQC' to install nanoQC, it looks well done. DNAseq of ONT: nanoQC -o outdir SRR26318748.fastq.gz RNAseq of ONT: nanoQC --rna -o outdir SRR26318747.fastq.gz Both programs ran...

nzhou-Irhs

TypeError: gridplot() got an unexpected keyword argument 'plot_width'

2

Hello, I have an error: Traceback (most recent call last): File "/Library/Frameworks/Python.framework/Versions/3.12/bin/nanoQC", line 8, in sys.exit(main()) ^^^^^^ File "/Library/Frameworks/Python.framework/Versions/3.12/lib/python3.12/site-packages/nanoQC/nanoQC.py", line 43, in main save(gridplot(children=[[hist], seq_plots, qual_plots], ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ TypeError: gridplot() got...

BartoszDombrow

Hi -- I recently was pointed to your NanoPack suite of tools and am enjoying checking out all the functionality you have made available -- thanks so much for this...

chucknordy

Seeking Assistance with nanoQC Tool Error

1

Hello, I am currently encountering an issue with the nanoQC tool. After installing it via `pip install`, I attempted to run a simple QC run on my `fastq.gz `file using...

Mitya-T