methplotlib
methplotlib copied to clipboard
ValueError: Invalid property specified for object of type plotly.graph_objs.scatter.marker.ColorBar: 'titleside'
Hi,
Thanks for developing such a great tools to visualize methylation result.
I encounter such an error when tried to run the command: methplotlib -m 24C1758.meth_region.sort.tsv.bgz -n 24C1758_viz -g hg38.ncbiRefSeq.gtf.gz -w chr14:100725705-100903722 --binary
The error is like:
Traceback (most recent call last):
File "/root/miniconda3/envs/methplotlib/bin/methplotlib", line 10, in
sys.exit(main())
File "/root/miniconda3/envs/methplotlib/lib/python3.9/site-packages/methplotlib/methplotlib.py", line 28, in main
meth_browser(
File "/root/miniconda3/envs/methplotlib/lib/python3.9/site-packages/methplotlib/methplotlib.py", line 67, in meth_browser
meth_traces = plots.methylation(
File "/root/miniconda3/envs/methplotlib/lib/python3.9/site-packages/methplotlib/plots.py", line 114, in methylation
make_per_read_meth_traces_llr(
File "/root/miniconda3/envs/methplotlib/lib/python3.9/site-packages/methplotlib/plots.py", line 257, in make_per_read_meth_traces_llr
make_per_position_likelihood_scatter(read_table=table, dotsize=dotsize)
File "/root/miniconda3/envs/methplotlib/lib/python3.9/site-packages/methplotlib/plots.py", line 383, in make_per_position_likelihood_scatter
return go.Scatter(
File "/root/miniconda3/envs/methplotlib/lib/python3.9/site-packages/plotly/graph_objs/_scatter.py", line 3534, in init
self["marker"] = _v
File "/root/miniconda3/envs/methplotlib/lib/python3.9/site-packages/plotly/basedatatypes.py", line 4852, in setitem
self._set_compound_prop(prop, value)
File "/root/miniconda3/envs/methplotlib/lib/python3.9/site-packages/plotly/basedatatypes.py", line 5263, in _set_compound_prop
val = validator.validate_coerce(val, skip_invalid=self._skip_invalid)
File "/root/miniconda3/envs/methplotlib/lib/python3.9/site-packages/_plotly_utils/basevalidators.py", line 2504, in validate_coerce
v = self.data_class(v, skip_invalid=skip_invalid, _validate=_validate)
File "/root/miniconda3/envs/methplotlib/lib/python3.9/site-packages/plotly/graph_objs/scatter/_marker.py", line 1622, in init
self["colorbar"] = _v
File "/root/miniconda3/envs/methplotlib/lib/python3.9/site-packages/plotly/basedatatypes.py", line 4852, in setitem
self._set_compound_prop(prop, value)
File "/root/miniconda3/envs/methplotlib/lib/python3.9/site-packages/plotly/basedatatypes.py", line 5263, in _set_compound_prop
val = validator.validate_coerce(val, skip_invalid=self._skip_invalid)
File "/root/miniconda3/envs/methplotlib/lib/python3.9/site-packages/_plotly_utils/basevalidators.py", line 2504, in validate_coerce
v = self.data_class(v, skip_invalid=skip_invalid, _validate=_validate)
File "/root/miniconda3/envs/methplotlib/lib/python3.9/site-packages/plotly/graph_objs/scatter/marker/_colorbar.py", line 2216, in init
self._process_kwargs(**dict(arg, **kwargs))
File "/root/miniconda3/envs/methplotlib/lib/python3.9/site-packages/plotly/basedatatypes.py", line 4378, in _process_kwargs
raise err
ValueError: Invalid property specified for object of type plotly.graph_objs.scatter.marker.ColorBar: 'titleside'
Did you mean "title"?
Do you know the reason? I would be grateful if you could help, thanks!
Best regards, Chloe