have issue reading dicom files

[mingtian126]

Hello, I have some issue while using the totalsegmentator. Figured out that some of the dicom file might be corrupted. Tested using the pydicom.dcmread to read the "corrupted" file, if the force=True was set, pydicom can read the file without issue, also tested import using imageJ with no problem. But if I didn't set force=True, it gave me error (invalid dicom file). Is there a way to help the totalsegmentator to get around this issue? Thanks!

[Peaceandmaths]

@mingtian126 I think TotalSegmentator is natively built to only work with nifti files (nii.gz not dcm). I would also need to use TS on dicom files, so if someone can give an insight on how to do it properly would be great !