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Modalities CT/MR and more structures ?

Open Peaceandmaths opened this issue 10 months ago • 2 comments

Two questions :

  • What should be done to adapt the TS to MRI scans in stead of CT ?
  • Could you add subcortical structures (thalamus, caudate, putamen, pallidum, hippocampus, amygdala, and nucleus accumbens) please ?

Thanks again for this tool !

Peaceandmaths avatar Apr 18 '24 23:04 Peaceandmaths

Two questions :

  • What should be done to adapt the TS to MRI scans in stead of CT ?
  • Could you add subcortical structures (thalamus, caudate, putamen, pallidum, hippocampus, amygdala, and nucleus accumbens) please ?

Thanks again for this tool !

I would also like to use the tool for MRI axial slices, at minimum to segment the vertebrae. I am trying out preprocessing of the MRI images to where the bones would be easier for the TS model to "see".

I can work with you and any others on this.

The TS tool is great! So far it has segmented the vertebrae on CT axial slices very well for our use case. @wasserth we appreciate your contribution to the community!

kulsoom-abdullah avatar Apr 22 '24 19:04 kulsoom-abdullah

We are currently working on adding support for MRI images and for subcortical structures. But it will take a bit more time.

wasserth avatar May 14 '24 13:05 wasserth