TotalSegmentator icon indicating copy to clipboard operation
TotalSegmentator copied to clipboard

Segment names not available in Slicer after command line segmentation

Open lennart81 opened this issue 10 months ago • 2 comments

Hi there,

I'm not sure if this is the best forum to add this but I would like to run segmentation on a linux server and review the files in slicer on a windows machine. Is it possible to have the organ names imported as well to 3D Slicer?

Thanks!

lennart81 avatar Apr 08 '24 14:04 lennart81

What do you mean by "organ names imported as well to 3D Slicer" ? Would you like to have the organ names instead of "Segment_1", "Segment_2" etc ?

Screenshot 2024-04-21 alle 16 58 38

francescopisu avatar Apr 21 '24 14:04 francescopisu

yes exactly! I solved it by using a custom color table.

Is there a listing of all models and subsets?

lennart81 avatar Jul 12 '24 08:07 lennart81