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About DICOM Image Input

Open U-ma-s opened this issue 1 year ago • 1 comments

Thanks for the excellent work!

Beginner's question: I am trying to do a liver segmentation by inputting a CT image in DICOM format. Is it possible to input a file with a '.dcm' extension? Or is there a way to convert the '.dcm' files to the format in the 'reference_files/example_ct_dicom' folder?

U-ma-s avatar Mar 13 '24 07:03 U-ma-s

The input needs to be a complete 3d volume. A single .dcm file is only a single 2D slice. Therefore you need a folder with all the slices. This folder needs to be the input to TotalSegmentator.

wasserth avatar Mar 13 '24 08:03 wasserth