cardiac-segmentation icon indicating copy to clipboard operation
cardiac-segmentation copied to clipboard

how did you perform multi scale center cropping

Open sanajabbarweb opened this issue 5 years ago • 4 comments

hi you have mentioned in your paper in data preparation section,'' we choose multi resolution approach to crop ROI at multiple size that wholly contain ventricles." where had you performed this in your code, if not how i can do this multi scale cropping of ROI.

sanajabbarweb avatar Jul 26 '19 07:07 sanajabbarweb

Multi-scale center cropping was not performed in this code. But if you want to perform multiple crops, you can specify a different size here: https://github.com/vuptran/cardiac-segmentation/blob/master/train_sunnybrook.py#L98

vuptran avatar Aug 02 '19 01:08 vuptran

thanks for your response. kindly would you elaborate that what is meant by multi crops of ROI. as per my understanding it will increase the size of training data. can you please refer that paper from where you have read this

sanajabbarweb avatar Aug 08 '19 08:08 sanajabbarweb

In my old implementation described in the paper, I increased the size of training data by cropping the center ROI with multiple crop sizes. So I doubled the size of training data by using two different crop sizes. However, in this Keras implementation I only used one crop size and was still able to get comparable performance with the old implementation.

vuptran avatar Aug 08 '19 10:08 vuptran

Hello! Could you tell me how to realize the visualization of segmentation results

Halleyawoo avatar Sep 11 '20 14:09 Halleyawoo