vmevada102

Probelm in recognition of rDock 0.1.3 in workflow

12

I am trying to import the Workflow "XChem combined" available online. In our Galaxy 19.04, the tool rdock_rbdock 0.1.3 is already installed still one error displayed for missing the dependency...

I am facing proble in finding the Antibiotics resistance gene from sample. As I have installed version 0.8 from galaxy repository. Which showing results with the database available in it....

Stopping in STEP10 -> 10.mapsamples.pl. Program finished abnormally Line no 18

4

I am receiving following error --- SAMPLE AJTDEW -------- Contig tax file /home/vishal/Desktop/squeezemetarun/anjana/anjana_td/AJTDEW/intermediate/09.AJTDEW.contiglog already found, skipping step 9 [0 seconds]: STEP10 -> MAPPING READS: 10.mapsamples.pl Can't find SqueezeMeta_conf.pl in /home/vishal/Desktop/squeezemetarun/anjana/anjana_td/AJTDEW/AJTDEW....

Facing problem in running Viralrecall

7

After installing into the Conda environment i am facing following problem, Traceback (most recent call last): File "viralrecall.py", line 733, in status = main() File "viralrecall.py", line 728, in main...

Could not build the fungi database

2

I am trying to use the prebuilt Fungal database for the fungal diversity study. I ran the following command. kraken2-build --download-library fungi --db fungi After completion of the data processing....