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Published 20 hours ago • verified publisher icon virajbdeshpande

1.3.r7, 1.3.r8, 1.4.r1 updates

Open jluebeck opened this issue 1 year ago • 1 comments

  • 1.3.r8 adds breakpoint microhomology detection from alignments marked as supplementary (not just secondary). Also tweaks sashimi plot visualization of CN.
  • 1.3.r7 refines the CN segmentation shown in the visualizations to prevent mismatches between displayed CN and coverage. Also allows SV VCF to use "." in the FILTER field instead of only "PASS". MOSEK convergence criteria relaxed slightly to prevent rare termination issues.

jluebeck avatar Feb 05 '24 17:02 jluebeck

@virajbdeshpande - Hi Viraj,

I have some changes waiting for merging. When you are able would you be able to take a look? I have resolved the merge conflicts already.

Thanks! Jens

jluebeck avatar Mar 23 '24 00:03 jluebeck