Raphael

Hi Caleb, Sorry to bother again, but I was wondering if by any chance you had to convert any of the hichipper output files to the .cool format. https://cooler.readthedocs.io/en/latest/cli.html#cooler-load I've...

--macs2-string parameter: can I use --control?

2

Thank you again for this tool, I'm trying to use the MACS2 parameter --control using Hi-C as input. However, I'm unsure how to proceed with the command to have the...