victorwang123

Cannot install s2 package

1

when I install monocle3 according to the instrument. It occurred the error Error: package or namespace load failed for ‘s2’ in dyn.load(file, DLLpath = DLLpath, ...): 无法载入共享目标对象‘/home/wangkun/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-s2/00new/s2/libs/s2.so’：: /home/wangkun/R/x86_64-pc-linux-gnu-library/4.0/00LOCK-s2/00new/s2/libs/s2.so: undefined symbol:...

Hi, when i run the following code： `netAnalysis_river(cellchat, pattern = "outgoing",font.size = 4)` and `netAnalysis_river(cellchat, pattern = "incoming",font.size = 4)` The cell groups in the two pictures are not the...

How can I choose the correct value of k based on these two pieces of data?

2

Thanks for your Cellchat. I'm wondering how can I choose the correct value of k based on these two pieces of data? Firstly, I use `selectK(cellchat, pattern = "incoming")` it...

Something wrong with "netVisual_aggregate"?

2

Thanks for your amazing work! When I use netVisual_aggregate to visualize the pathways signals, each dot (which present one cell_type) is the same size, not each point can reflect the...

hi，I have an emergency problem I cannot repeat the monocle2 result that I have done last month. The data and code are same，but the result is different.What should I do...

How to set the 'expected_doublet_rate' in Scrublet?

1

As I follow the Chromium User Guide[https://support.10xgenomics.com/permalink/3vzDu3zQjY0o2AqkkkI4CC](url) However, the number of my samples greatly beyond it, (e.g. One sample had 21546 cells), I want to know how to set the...

Hello, I just got the final results from scrublet, I want to know how to use the file to perform QC?