velocyto.R
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installation error on Rstudio sever
Hi, I am using the Rstudio in a linux server. I am getting the following error when I try to install the velocyto.R:
`/usr/bin/ld: cannot find -lboost_filesystem /usr/bin/ld: cannot find -lboost_system collect2: error: ld returned 1 exit status make: *** [/apps/RH7U2/gnu/R/3.5.1/lib64/R/share/make/shlib.mk:6: velocyto.R.so] Error 1 ERROR: compilation failed for package ‘velocyto.R’
- removing ‘/home/labs/shalev/hassanm/R/x86_64-pc-linux-gnu-library/3.5/velocyto.R’ Error: Failed to install 'velocyto.R' from GitHub: (converted from warning) installation of package '/tmp/RtmpO03ENE/file97f664f530a7/velocyto.R_0.6.tar.gz' had non-zero exit status`
Any suggestions? Thanks, HM
Same issue, did you manage to solve? thanks
in case it can help, managed to install velocyto by install boost with conda, and having conda session activate while running R and installing velocyto.
Thanks, I contacted the IT unit and they did the job. HM