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Published 20 hours ago • verified publisher icon velocyto-team

pyvelocyto on data from different platforms

Open gouthamatla opened this issue 5 years ago • 0 comments

Hi,

I have aligned bam files from different platforms (Smartseq2 and inDrop methods). Is it possible to run pyvelocyto on a population of cells coming from different platforms ? I already have the individual bam files. Is it just running the following command ?

velocyto run -c -U BAMFILE... GTFFILE

Thanks, Goutham A

gouthamatla avatar Mar 06 '19 11:03 gouthamatla