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HyPhy standalone analyses

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Hi , I am new to this field and I am currently working on my master's thesis, focusing on the evolution of a specific morphological trait., I've opted to analyze...

I am trying to obtain the global kappa value, I have found that I can do this in the command line using the interactive tool by selecting the following: ```...

Is there an implementation of MCMCtree in the works? Do you think it is feasible to implement it in Hyphy? Thanks, Olivier

Dear @spond, Please see below: