seq2science FR: R `samples` read from samples.to_string in params instead of parse in R

FR: R `samples` read from samples.to_string in params instead of parse in R

Open Maarten-vd-Sande opened this issue 2 years ago • 3 comments

Is your feature request related to a problem? Please describe. Might be a more sustainable way of doing these things

I guess in a sense related to #537, and should fix that

Related : #788

Dec 02 '21 08:12 Maarten-vd-Sande

Is this still relevant? If so, what is blocking it? Is there anything you can do to help move it forward?

Apr 16 '22 13:04 stale[bot]

deseq2science currently needs to parse the samples.tsv file within R, so we'll still need this function anyway. Can let this go stale...

We could refactor deseq2science, and make it a snakemake workflow as well, but this has no priority, so I probably wont.

Apr 19 '22 11:04 siebrenf

Is this still relevant? If so, what is blocking it? Is there anything you can do to help move it forward?

Jul 10 '22 09:07 stale[bot]