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FR: test data for ATAC

Open Maarten-vd-Sande opened this issue 5 years ago • 1 comments

I've been placing this at the bottom of my TODO list for waaaaay too long now. After migration is done this should be a top priority.

@siebrenf you'll be happy with this :)

Maarten-vd-Sande avatar May 28 '20 11:05 Maarten-vd-Sande

We've been using a very small subset of RNA-seq data for our tests. Rule blind_clustering, and now also deeptools bamCoverage (with the BPM normalization and strand filtering in RNA-seq), aren't working properly due to their size.

Unless the unit tests from #545 make these tests obsolete, RNA-seq is also in need of better test data.

siebrenf avatar Nov 12 '20 15:11 siebrenf