OAI_analysis_2 icon indicating copy to clipboard operation
OAI_analysis_2 copied to clipboard

Published 20 hours ago • verified publisher icon uncbiag
→

Metadata

Image analysis approaches to analyze the OAI magnetic resonance images

Results 16 OAI_analysis_2 issues
Sort by recently updated
recently updated
newest added

Create consistent software environment, for testing, cloud

thewtex avatar thewtex

narrative draft

Added some questions and functions at the top of the notebook, and included some narrative. Happy to change whatever needed! Let me know what you think!

sbonaretti avatar sbonaretti

Add testing for notebooks

https://github.com/treebeardtech/nbmake

thewtex avatar thewtex

Thickness estimation improvements, ORMIR notebook

@marcniethammer @sbonaretti please take a look :pray: Rendered notebook: https://github.com/uncbiag/OAI_analysis_2/blob/2557665fa3a70d5b69647a8c3ae6e4aa7b12e495/notebooks/ProbabilityMapThicknessORMIR.ipynb

thewtex avatar thewtex

--pre is required to install alpha version of itkwidgets

This does not work with Python 3.12, as ITK 5.3 is not compiled for it. Python 3.11 or earlier is required.

dzenanz avatar dzenanz

Switch to uniGradICON

Use https://github.com/uncbiag/uniGradICON for registration.

dzenanz avatar dzenanz

← Metadata

17
Stars
7
Forks
Watchers

Owner

verified publisher icon uncbiag

Metadata

Image analysis approaches to analyze the OAI magnetic resonance images

Back