Yang Tan

icon indicating a website link https://tyang816.github.io/

icon company ECUST -> SJTU & Shanghai AI Lab icon location Shanghai, China icon location AI4Science & Deep Learninging

Results 12 comments of Yang Tan

Discrepancy in structure quantizer outputs and request for original PDB files used in the proteingym_benchmark.zip

We have updated the structure token generator, plz have a try! The original PDB dataset is the same as [ProtSSN](https://github.com/ai4protein/ProtSSN), which can be downloaded from [Huggingface](https://huggingface.co/datasets/tyang816/ProteinGym_v1/resolve/main/ProteinGym_v1_AlphaFold2_PDB.zip).

PdbQuantizer stuck

Hi, Sorry for the late reply, we have updated the PdbQuantizer, plz have a try!