Trish Whetzel

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Results 43 issues of Trish Whetzel

The EMC pipeline adds new synonyms that are duplicates of existing synonyms due to differences in the letter case

In the Sep 2024 run of the GH Action [Update Externally Provided Content](https://github.com/monarch-initiative/mondo/actions/workflows/external_content.yaml) in the [resulting PR](https://github.com/monarch-initiative/mondo/pull/8169/files#r1763617120) a "duplicate" new synonym from NORD was found where the synonym only varied...

Bug in updating MedGen Externally Managed Content

In the latest run of the externally managed content pipeline, [a change was reverted for an xref from medgen](https://github.com/monarch-initiative/mondo/pull/8169/files#diff-889e0a9ba62d62cc6ee7c5c9bead0075444d506253590ef0dcf4786904ac6768R62224). The [latest medgen.obo file](https://github.com/monarch-initiative/medgen/releases/tag/2024-09-15) does have the correct xref for `MONDO_0003406`...

bug
tech

Add dotenv requirement

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I am working with a [repo](https://github.com/monarch-initiative/omim/tree/main) that uses an API Key from a `.env` file, however when I run make commands for the repo I get "ModuleNotFoundError: No module named...