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Published 20 hours ago • verified publisher icon ttscoff

Installation problem : nokogirl

Open Almarenan opened this issue 9 years ago • 14 comments

Hi,

I'm trying to re-install Slogger on a new Mac running OS 10.11.3 and I've encountered a series of problems in the bundle install phase of the process.

First was the An error occurred while installing rmagick (2.13.2), and Bundler cannot continue. problem but I commented the gem 'rmagick', '2.13.2' # required for lastcover line in the Gemfile and got past that. Problem is, now, the install of nokogirldoesn't seem to complete and everything is stalled with the message : An error occurred while installing nokogiri (1.6.7.2), and Bundler cannot continue. Make sure that``gem install nokogiri -v '1.6.7.2'``succeeds before bundling.

Any idea ?

Almarenan avatar Feb 05 '16 11:02 Almarenan

Did you run gem install nokogiri -v '1672' to see what error you got? You can also run sudo gem install nokogiri -v '1672' to avoid any permissions issues. If you get an error running that, post that here.

-Brett

On 5 Feb 2016, at 5:42, Almarenan wrote:

Hi,

I'm trying to re-install Slogger on a new Mac running OS 10113 and I've encountered a series of problems in the bundle install phase of the process

First was the An error occurred while installing rmagick (2132), and Bundler cannot continue problem but I commented the gem 'rmagick', '2132' # required for lastcover line in the Gemfile and got past that Problem is, now, the install of nokogirldoesn't seem to complete and everything is stalled with the message : An error occurred while installing nokogiri (1672), and Bundler cannot continue Make sure that``gem install nokogiri -v '1672'``succeeds before bundling

Any idea ?

Reply to this email directly or view it on GitHub: https://github.com/ttscoff/Slogger/issues/399

ttscoff avatar Feb 05 '16 14:02 ttscoff

OK, did what you suggested -sudo version- and that's what I got in return :

ERROR: Error installing nokogiri: ERROR: Failed to build gem native extension.

/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/bin/ruby extconf.rb

checking if the C compiler accepts ... yes checking if the C compiler accepts -Wno-error=unused-command-line-argument-hard-error-in-future... no Building nokogiri using packaged libraries. Using mini_portile version 2.0.0 checking for iconv.h... yes checking for gzdopen() in -lz... yes checking for iconv... yes

IMPORTANT NOTICE:

Building Nokogiri with a packaged version of libxml2-2.9.2 with the following patches applied:

  • 0001-Revert-Missing-initialization-for-the-catalog-module.patch
  • 0002-Fix-missing-entities-after-CVE-2014-3660-fix.patch
  • 0003-Stop-parsing-on-entities-boundaries-errors.patch
  • 0004-Cleanup-conditional-section-error-handling.patch
  • 0005-CVE-2015-1819-Enforce-the-reader-to-run-in-constant-.patch
  • 0006-Another-variation-of-overflow-in-Conditional-section.patch
  • 0007-Fix-an-error-in-previous-Conditional-section-patch.patch
  • 0008-CVE-2015-8035-Fix-XZ-compression-support-loop.patch
  • 0009-Updated-config.guess.patch
  • 0010-Fix-parsering-short-unclosed-comment-uninitialized-access.patch
  • 0011-Avoid-extra-processing-of-MarkupDecl-when-EOF.patch
  • 0012-Avoid-processing-entities-after-encoding-conversion-.patch
  • 0013-CVE-2015-7497-Avoid-an-heap-buffer-overflow-in-xmlDi.patch
  • 0014-CVE-2015-5312-Another-entity-expansion-issue.patch
  • 0015-Add-xmlHaltParser-to-stop-the-parser.patch
  • 0016-Detect-incoherency-on-GROW.patch
  • 0017-CVE-2015-7500-Fix-memory-access-error-due-to-incorre.patch
  • 0018-CVE-2015-8242-Buffer-overead-with-HTML-parser-in-pus.patch
  • 0019-Do-not-print-error-context-when-there-is-none.patch
  • 0020-xmlStopParser-reset-errNo.patch
  • 0021-Reuse-xmlHaltParser-where-it-makes-sense.patch

Team Nokogiri will keep on doing their best to provide security updates in a timely manner, but if this is a concern for you and want to use the system library instead; abort this installation process and reinstall nokogiri as follows:

gem install nokogiri -- --use-system-libraries
    [--with-xml2-config=/path/to/xml2-config]
    [--with-xslt-config=/path/to/xslt-config]

If you are using Bundler, tell it to use the option:

bundle config build.nokogiri --use-system-libraries
bundle install

Note, however, that nokogiri is not fully compatible with arbitrary versions of libxml2 provided by OS/package vendors.

Extracting libxml2-2.9.2.tar.gz into tmp/x86_64-apple-darwin15/ports/libxml2/2.9.2... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0001-Revert-Missing-initialization-for-the-catalog-module.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0002-Fix-missing-entities-after-CVE-2014-3660-fix.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0003-Stop-parsing-on-entities-boundaries-errors.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0004-Cleanup-conditional-section-error-handling.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0005-CVE-2015-1819-Enforce-the-reader-to-run-in-constant-.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0006-Another-variation-of-overflow-in-Conditional-section.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0007-Fix-an-error-in-previous-Conditional-section-patch.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0008-CVE-2015-8035-Fix-XZ-compression-support-loop.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0009-Updated-config.guess.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0010-Fix-parsering-short-unclosed-comment-uninitialized-access.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0011-Avoid-extra-processing-of-MarkupDecl-when-EOF.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0012-Avoid-processing-entities-after-encoding-conversion-.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0013-CVE-2015-7497-Avoid-an-heap-buffer-overflow-in-xmlDi.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0014-CVE-2015-5312-Another-entity-expansion-issue.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0015-Add-xmlHaltParser-to-stop-the-parser.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0016-Detect-incoherency-on-GROW.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0017-CVE-2015-7500-Fix-memory-access-error-due-to-incorre.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0018-CVE-2015-8242-Buffer-overead-with-HTML-parser-in-pus.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0019-Do-not-print-error-context-when-there-is-none.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0020-xmlStopParser-reset-errNo.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0021-Reuse-xmlHaltParser-where-it-makes-sense.patch... OK Running 'configure' for libxml2 2.9.2... OK Running 'compile' for libxml2 2.9.2... OK Running 'install' for libxml2 2.9.2... OK Activating libxml2 2.9.2 (from /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/ports/x86_64-apple-darwin15/libxml2/2.9.2)...

IMPORTANT NOTICE:

Building Nokogiri with a packaged version of libxslt-1.1.28 with the following patches applied:

  • 0001-Adding-doc-update-related-to-1.1.28.patch
  • 0002-Fix-a-couple-of-places-where-f-printf-parameters-wer.patch
  • 0003-Initialize-pseudo-random-number-generator-with-curre.patch
  • 0004-EXSLT-function-str-replace-is-broken-as-is.patch
  • 0006-Fix-str-padding-to-work-with-UTF-8-strings.patch
  • 0007-Separate-function-for-predicate-matching-in-patterns.patch
  • 0008-Fix-direct-pattern-matching.patch
  • 0009-Fix-certain-patterns-with-predicates.patch
  • 0010-Fix-handling-of-UTF-8-strings-in-EXSLT-crypto-module.patch
  • 0013-Memory-leak-in-xsltCompileIdKeyPattern-error-path.patch
  • 0014-Fix-for-bug-436589.patch
  • 0015-Fix-mkdir-for-mingw.patch
  • 0016-Fix-for-type-confusion-in-preprocessing-attributes.patch
  • 0017-Updated-config.guess.patch

Team Nokogiri will keep on doing their best to provide security updates in a timely manner, but if this is a concern for you and want to use the system library instead; abort this installation process and reinstall nokogiri as follows:

gem install nokogiri -- --use-system-libraries
    [--with-xml2-config=/path/to/xml2-config]
    [--with-xslt-config=/path/to/xslt-config]

If you are using Bundler, tell it to use the option:

bundle config build.nokogiri --use-system-libraries
bundle install

Extracting libxslt-1.1.28.tar.gz into tmp/x86_64-apple-darwin15/ports/libxslt/1.1.28... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0001-Adding-doc-update-related-to-1.1.28.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0002-Fix-a-couple-of-places-where-f-printf-parameters-wer.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0003-Initialize-pseudo-random-number-generator-with-curre.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0004-EXSLT-function-str-replace-is-broken-as-is.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0006-Fix-str-padding-to-work-with-UTF-8-strings.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0007-Separate-function-for-predicate-matching-in-patterns.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0008-Fix-direct-pattern-matching.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0009-Fix-certain-patterns-with-predicates.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0010-Fix-handling-of-UTF-8-strings-in-EXSLT-crypto-module.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0013-Memory-leak-in-xsltCompileIdKeyPattern-error-path.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0014-Fix-for-bug-436589.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0015-Fix-mkdir-for-mingw.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0016-Fix-for-type-confusion-in-preprocessing-attributes.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0017-Updated-config.guess.patch... OK Running 'configure' for libxslt 1.1.28... OK Running 'compile' for libxslt 1.1.28... OK Running 'install' for libxslt 1.1.28... OK Activating libxslt 1.1.28 (from /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/ports/x86_64-apple-darwin15/libxslt/1.1.28)... checking for main() in -llzma... yes checking for xmlParseDoc() in libxml/parser.h... no checking for xmlParseDoc() in -lxml2... no

checking for xmlParseDoc() in -llibxml2... no

libxml2 is missing. Please locate mkmf.log to investigate how it is failing.

*** extconf.rb failed *** Could not create Makefile due to some reason, probably lack of necessary libraries and/or headers. Check the mkmf.log file for more details. You may need configuration options.

Provided configuration options: --with-opt-dir --without-opt-dir --with-opt-include --without-opt-include=${opt-dir}/include --with-opt-lib --without-opt-lib=${opt-dir}/lib --with-make-prog --without-make-prog --srcdir=. --curdir --ruby=/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/bin/ruby --help --clean --use-system-libraries --enable-static --disable-static --with-zlib-dir --without-zlib-dir --with-zlib-include --without-zlib-include=${zlib-dir}/include --with-zlib-lib --without-zlib-lib=${zlib-dir}/lib --enable-cross-build --disable-cross-build --with-xml2lib --without-xml2lib --with-libxml2lib --without-libxml2lib

Gem files will remain installed in /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2 for inspection. Results logged to /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/ext/nokogiri/gem_make.out

Almarenan avatar Feb 05 '16 16:02 Almarenan

It looks like you need to verify the libxml installation. sudo gem install libxml2 and see what happens.

On 5 Feb 2016, at 10:37, Almarenan wrote:

OK, did what you suggested -sudo version- and that's what I got in return :

ERROR: Error installing nokogiri: ERROR: Failed to build gem native extension.

/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/bin/ruby extconf.rb checking if the C compiler accepts ... yes checking if the C compiler accepts -Wno-error=unused-command-line-argument-hard-error-in-future... no Building nokogiri using packaged libraries. Using mini_portile version 2.0.0 checking for iconv.h... yes checking for gzdopen() in -lz... yes checking for iconv... yes

IMPORTANT NOTICE:

Building Nokogiri with a packaged version of libxml2-2.9.2 with the following patches applied:

  • 0001-Revert-Missing-initialization-for-the-catalog-module.patch
  • 0002-Fix-missing-entities-after-CVE-2014-3660-fix.patch
  • 0003-Stop-parsing-on-entities-boundaries-errors.patch
  • 0004-Cleanup-conditional-section-error-handling.patch
  • 0005-CVE-2015-1819-Enforce-the-reader-to-run-in-constant-.patch
  • 0006-Another-variation-of-overflow-in-Conditional-section.patch
  • 0007-Fix-an-error-in-previous-Conditional-section-patch.patch
  • 0008-CVE-2015-8035-Fix-XZ-compression-support-loop.patch
  • 0009-Updated-config.guess.patch
  • 0010-Fix-parsering-short-unclosed-comment-uninitialized-access.patch
  • 0011-Avoid-extra-processing-of-MarkupDecl-when-EOF.patch
  • 0012-Avoid-processing-entities-after-encoding-conversion-.patch
  • 0013-CVE-2015-7497-Avoid-an-heap-buffer-overflow-in-xmlDi.patch
  • 0014-CVE-2015-5312-Another-entity-expansion-issue.patch
  • 0015-Add-xmlHaltParser-to-stop-the-parser.patch
  • 0016-Detect-incoherency-on-GROW.patch
  • 0017-CVE-2015-7500-Fix-memory-access-error-due-to-incorre.patch
  • 0018-CVE-2015-8242-Buffer-overead-with-HTML-parser-in-pus.patch
  • 0019-Do-not-print-error-context-when-there-is-none.patch
  • 0020-xmlStopParser-reset-errNo.patch
  • 0021-Reuse-xmlHaltParser-where-it-makes-sense.patch

Team Nokogiri will keep on doing their best to provide security updates in a timely manner, but if this is a concern for you and want to use the system library instead; abort this installation process and reinstall nokogiri as follows:

gem install nokogiri -- --use-system-libraries [--with-xml2-config=/path/to/xml2-config] [--with-xslt-config=/path/to/xslt-config]

If you are using Bundler, tell it to use the option:

bundle config build.nokogiri --use-system-libraries bundle install

Note, however, that nokogiri is not fully compatible with arbitrary versions of libxml2 provided by OS/package vendors.

Extracting libxml2-2.9.2.tar.gz into tmp/x86_64-apple-darwin15/ports/libxml2/2.9.2... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0001-Revert-Missing-initialization-for-the-catalog-module.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0002-Fix-missing-entities-after-CVE-2014-3660-fix.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0003-Stop-parsing-on-entities-boundaries-errors.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0004-Cleanup-conditional-section-error-handling.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0005-CVE-2015-1819-Enforce-the-reader-to-run-in-constant-.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0006-Another-variation-of-overflow-in-Conditional-section.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0007-Fix-an-error-in-previous-Conditional-section-patch.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0008-CVE-2015-8035-Fix-XZ-compression-support-loop.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0009-Updated-config.guess.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0010-Fix-parsering-short-unclosed-comment-uninitialized-access.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0011-Avoid-extra-processing-of-MarkupDecl-when-EOF.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0012-Avoid-processing-entities-after-encoding-conversion-.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0013-CVE-2015-7497-Avoid-an-heap-buffer-overflow-in-xmlDi.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0014-CVE-2015-5312-Another-entity-expansion-issue.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0015-Add-xmlHaltParser-to-stop-the-parser.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0016-Detect-incoherency-on-GROW.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0017-CVE-2015-7500-Fix-memory-access-error-due-to-incorre.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0018-CVE-2015-8242-Buffer-overead-with-HTML-parser-in-pus.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0019-Do-not-print-error-context-when-there-is-none.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0020-xmlStopParser-reset-errNo.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxml2/0021-Reuse-xmlHaltParser-where-it-makes-sense.patch... OK Running 'configure' for libxml2 2.9.2... OK Running 'compile' for libxml2 2.9.2... OK Running 'install' for libxml2 2.9.2... OK Activating libxml2 2.9.2 (from /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/ports/x86_64-apple-darwin15/libxml2/2.9.2)...

IMPORTANT NOTICE:

Building Nokogiri with a packaged version of libxslt-1.1.28 with the following patches applied:

  • 0001-Adding-doc-update-related-to-1.1.28.patch
  • 0002-Fix-a-couple-of-places-where-f-printf-parameters-wer.patch
  • 0003-Initialize-pseudo-random-number-generator-with-curre.patch
  • 0004-EXSLT-function-str-replace-is-broken-as-is.patch
  • 0006-Fix-str-padding-to-work-with-UTF-8-strings.patch
  • 0007-Separate-function-for-predicate-matching-in-patterns.patch
  • 0008-Fix-direct-pattern-matching.patch
  • 0009-Fix-certain-patterns-with-predicates.patch
  • 0010-Fix-handling-of-UTF-8-strings-in-EXSLT-crypto-module.patch
  • 0013-Memory-leak-in-xsltCompileIdKeyPattern-error-path.patch
  • 0014-Fix-for-bug-436589.patch
  • 0015-Fix-mkdir-for-mingw.patch
  • 0016-Fix-for-type-confusion-in-preprocessing-attributes.patch
  • 0017-Updated-config.guess.patch

Team Nokogiri will keep on doing their best to provide security updates in a timely manner, but if this is a concern for you and want to use the system library instead; abort this installation process and reinstall nokogiri as follows:

gem install nokogiri -- --use-system-libraries [--with-xml2-config=/path/to/xml2-config] [--with-xslt-config=/path/to/xslt-config]

If you are using Bundler, tell it to use the option:

bundle config build.nokogiri --use-system-libraries bundle install

Extracting libxslt-1.1.28.tar.gz into tmp/x86_64-apple-darwin15/ports/libxslt/1.1.28... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0001-Adding-doc-update-related-to-1.1.28.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0002-Fix-a-couple-of-places-where-f-printf-parameters-wer.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0003-Initialize-pseudo-random-number-generator-with-curre.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0004-EXSLT-function-str-replace-is-broken-as-is.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0006-Fix-str-padding-to-work-with-UTF-8-strings.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0007-Separate-function-for-predicate-matching-in-patterns.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0008-Fix-direct-pattern-matching.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0009-Fix-certain-patterns-with-predicates.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0010-Fix-handling-of-UTF-8-strings-in-EXSLT-crypto-module.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0013-Memory-leak-in-xsltCompileIdKeyPattern-error-path.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0014-Fix-for-bug-436589.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0015-Fix-mkdir-for-mingw.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0016-Fix-for-type-confusion-in-preprocessing-attributes.patch... OK Running git apply with /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/patches/libxslt/0017-Updated-config.guess.patch... OK Running 'configure' for libxslt 1.1.28... OK Running 'compile' for libxslt 1.1.28... OK Running 'install' for libxslt 1.1.28... OK Activating libxslt 1.1.28 (from /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/ports/x86_64-apple-darwin15/libxslt/1.1.28)... checking for main() in -llzma... yes checking for xmlParseDoc() in libxml/parser.h... no checking for xmlParseDoc() in -lxml2... no

checking for xmlParseDoc() in -llibxml2... no

libxml2 is missing. Please locate mkmf.log to investigate how it is

failing.

*** extconf.rb failed *** Could not create Makefile due to some reason, probably lack of necessary libraries and/or headers. Check the mkmf.log file for more details.
You may need configuration options.

Provided configuration options: --with-opt-dir --without-opt-dir --with-opt-include --without-opt-include=${opt-dir}/include --with-opt-lib --without-opt-lib=${opt-dir}/lib --with-make-prog --without-make-prog --srcdir=. --curdir --ruby=/System/Library/Frameworks/Ruby.framework/Versions/2.0/usr/bin/ruby --help --clean --use-system-libraries --enable-static --disable-static --with-zlib-dir --without-zlib-dir --with-zlib-include --without-zlib-include=${zlib-dir}/include --with-zlib-lib --without-zlib-lib=${zlib-dir}/lib --enable-cross-build --disable-cross-build --with-xml2lib --without-xml2lib --with-libxml2lib --without-libxml2lib

Gem files will remain installed in /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2 for inspection. Results logged to /Library/Ruby/Gems/2.0.0/gems/nokogiri-1.6.7.2/ext/nokogiri/gem_make.out

Reply to this email directly or view it on GitHub: https://github.com/ttscoff/Slogger/issues/399#issuecomment-180431766

ttscoff avatar Feb 05 '16 16:02 ttscoff

sudo gem install libxml2 => ERROR: Could not find a valid gem 'libxml2' (>= 0) in any repository

Almarenan avatar Feb 05 '16 18:02 Almarenan

Sorry, try with 'libxml-ruby'.

On 5 Feb 2016, at 12:02, Almarenan wrote:

sudo gem install libxml2 => ERROR: Could not find a valid gem 'libxml2' (>= 0) in any repository

Reply to this email directly or view it on GitHub: https://github.com/ttscoff/Slogger/issues/399#issuecomment-180472279

ttscoff avatar Feb 05 '16 19:02 ttscoff

Seems to go normally :

Fetching: libxml-ruby-2.8.0.gem (100%) Building native extensions. This could take a while... Successfully installed libxml-ruby-2.8.0 Parsing documentation for libxml-ruby-2.8.0 unable to convert "\xCA" from ASCII-8BIT to UTF-8 for lib/libxml_ruby.bundle, skipping Installing ri documentation for libxml-ruby-2.8.0 1 gem installed

Almarenan avatar Feb 05 '16 20:02 Almarenan

Did you try the bundle install again after that succeeded?

On 5 Feb 2016, at 14:05, Almarenan wrote:

Seems to go normally :

Fetching: libxml-ruby-2.8.0.gem (100%) Building native extensions. This could take a while... Successfully installed libxml-ruby-2.8.0 Parsing documentation for libxml-ruby-2.8.0 unable to convert "\xCA" from ASCII-8BIT to UTF-8 for lib/libxml_ruby.bundle, skipping Installing ri documentation for libxml-ruby-2.8.0 1 gem installed

Reply to this email directly or view it on GitHub: https://github.com/ttscoff/Slogger/issues/399#issuecomment-180536360

ttscoff avatar Feb 05 '16 20:02 ttscoff

Yep, same error message while installing nokogiri : An error occurred while installing nokogiri (1.6.7.2), and Bundler cannot continue.

Almarenan avatar Feb 05 '16 20:02 Almarenan

Have you tried a sudo bundle install? If so, or that doesn't work, I'm afraid I can't recall any other solutions. Maybe someone else has an idea…

ttscoff avatar Feb 05 '16 20:02 ttscoff

Actually, I had the last error message after doing exactly that.

Almarenan avatar Feb 05 '16 20:02 Almarenan

I really hope that someone has an idea, I do love Slogger.
Thanks for responding anyway.

Almarenan avatar Feb 05 '16 20:02 Almarenan

I've had this problem ever since trying to install on a new computer that came with El Capitan. Any chance it's related to the 'system integrity protection' feature?

jcrbuzz avatar Feb 06 '16 13:02 jcrbuzz

I've juste tried to install again after disabling SIP (csrutil disable while rebooted in Recovery mode), no dice, still no nokogiri.

Almarenan avatar Feb 06 '16 18:02 Almarenan

Having same issue here, commenting in case anyone finds a solution. On 10.11.5, have root protection off.

An error occurred while installing nokogiri (1.6.8), and Bundler cannot continue.
Make sure that `gem install nokogiri -v '1.6.8'` succeeds before bundling.

CameronBanga avatar Jun 15 '16 17:06 CameronBanga