Upgrade actions and use numpy2

[benjeffery]

[benjeffery]

We need an arm64 kastore conda package - I'm not sure why there isn't one as we have them for tskit. Will investigate.

[jeromekelleher]

Ah, it's something you need to explicitly enable. Look back through tskit-feedstock prs

[codecov[bot]]

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 91.09%. Comparing base (cbb5db3) to head (3ce6b2f).

Additional details and impacted files

@@            Coverage Diff             @@
##             main    #2287      +/-   ##
==========================================
- Coverage   98.70%   91.09%   -7.62%     
==========================================
  Files          11       20       +9     
  Lines        4029    11918    +7889     
  Branches      908     2433    +1525     
==========================================
+ Hits         3977    10857    +6880     
- Misses         28      581     +553     
- Partials       24      480     +456     

Flag	Coverage Δ
C	91.09% <ø> (?)
python	98.70% <ø> (-0.01%)	:arrow_down:

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[jeromekelleher]

Any idea why these doc link references are failing now?

[benjeffery]

Really weird error from the docs not finding a cross-link. I've decoded and checked the objects.inv and the cross-link is there.

[jeromekelleher]

Let's just set the docs build to not error on warning for now, log an issue and get the rest shipped out.

[benjeffery]

Running wheel build tests then will merge.

[benjeffery]

Seems I need to follow https://github.com/matthew-brett/delocate?tab=readme-ov-file#making-dual-architecture-binaries to get the wheels for OSX