snp-dists icon indicating copy to clipboard operation
snp-dists copied to clipboard

Published 20 hours ago • verified publisher icon tseemann

Sequences with different lengths

Open asierFernandezP opened this issue 1 year ago • 1 comments

Hi,

Is it possible to perform the snp-dists analysis with a fasta file of sequences with different lengths as input?

Thanks in advance,

Asier

asierFernandezP avatar Dec 16 '22 09:12 asierFernandezP

No. snp-dists requires all sequences to be of identical length. If your sequences are of varying length you have to align them first.

kloetzl avatar Dec 17 '22 15:12 kloetzl