Error with dependency version (snpEff) when submitting job using sbatch

[Guan06]

Hi, I am using snippy and have snpEff 5.1d installed when installing snippy. Test run smoothly locally but error occur when submitting job to HPC using sbatch.

[15:43:07] Found snpEff - /hpc-work/.conda/envs/snippy/bin/snpEff ... ... [15:43:07] Need snpEff -version >= 4.3 but you have 0.001 - please upgrade it.

However when I check the version of snpEff, it is correct version 5.1d.

Wondering what cuased the error..

Many thanks and best. Rui