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Published 20 hours ago • verified publisher icon tseemann

SnpEff filtering problem

Open Farzaana14 opened this issue 2 years ago • 0 comments

Is there a way to remove SnpEff filters on the output of the vcf file. I want to include the non-coding regions?

##SnpEffCmd="SnpEff -noStats -no-downstream -no-upstream -no-utr ref snps.filt.vcf "

Farzaana14 avatar Sep 02 '21 12:09 Farzaana14