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Multiple reference genomes

Open snigdhaAgarwal opened this issue 2 years ago • 0 comments

Is it possible to call variants for 3 samples against Reference genome 1 and then align a reference genome 2 against reference genome 1, and then finally generate 1 tree including all 5 items like shown below? Screen Shot 2021-08-09 at 10 25 39 AM

snigdhaAgarwal avatar Aug 09 '21 17:08 snigdhaAgarwal