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Get bug with snippy-core
Hi @tseemann I use my previous command that worked well with my previous ubuntu and conda environment. The command is snippy-core --ref K96243.gb 10-*
When use this command with snippy version 3.2, I got a bug like this.
[11:00:29] Loading Snippy folders [11:00:29] Using ID '10-001' for 10-001 [11:00:29] 10-001: found 20359 variants totalling 23606 bp in 10-001/snps.tab [11:00:29] Using provided reference: K96243.gb
------------- EXCEPTION ------------- MSG: The sequence does not appear to be FASTA format (lacks a descriptor line '>') STACK Bio::SeqIO::fasta::next_seq /home/nc-bioinfo/anaconda3/lib/perl5/site_perl/5.22.0/Bio/SeqIO/fasta.pm:136 STACK toplevel /home/nc-bioinfo/anaconda3/bin/snippy-core:44
Thanks in advance