prokka
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Cannot download DB of viruses
I am new to bioinformatics field and I wanted to try prokka so I installed it and it says I have to run prokka --setupdb
during that it says
Error: File existence/permissions problem in trying to open CM file /home/ruqaiya/.local/lib/prokka/db/cm/Viruses. CM file /home/ruqaiya/.local/lib/prokka/db/cm/Viruses not found (nor an .i1m binary of it)
I am installing it on conda on WSL
`which cmpress
/usr/bin/cmpress
cmpress -h
cmpress :: prepare an CM database for faster cmscan searches
INFERNAL 1.1.4 (Dec 2020)
Copyright (C) 2020 Howard Hughes Medical Institute.
Freely distributed under the BSD open source license.
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Usage: cmpress [-options]
Options: -h : show brief help on version and usage -F : force: overwrite any previous pressed files ls -lsa /usr/local/bin/../db/cm/Viruses ls: cannot access '/usr/local/bin/../db/cm/Viruses': No such file or directory`