prokka
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Space missing in GenBank annotation file
Dear @tseemann,
I have spotted what I think could be a small bug in the output .gbk
file from Prokka. I noticed the contig names were not matching those of the input sequences and I realised it seems to be because there is a space missing between the contig name and the sequence length, so that the contig names becomes longer.
For example, for the contig w.thymelicus_acteon.SP_TA_344_1, with length 664073bp, the first line of the file was:
LOCUS w.thymelicus_acteon.SP_TA_344_1664073 bp DNA linear
Instead of:
LOCUS w.thymelicus_acteon.SP_TA_344_1 664073 bp DNA linear