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calling two overlapping sequences separate partial 16S sequences

Open ileleiwi opened this issue 3 years ago • 0 comments

I’m running barrnap on a fasta of bins with default settings. The resulting GFF contains some instances where sequential sequences (or sequences with a few bases overlapping) are being called as two partial sequences rather than one more complete sequence. Is this something you have seen before or is there a way to tell if this is an error or maybe two adjacent 16S copies?

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ileleiwi avatar May 04 '21 17:05 ileleiwi