Taylor Salo

I might not be thinking about this the right way, but in my case (XCP-D), we warp atlases to the standard space and resolution used across runs (and potentially subjects),...

Regarding this issue, I'd be happy to open a PR to add the acquisition boilerplate into fmriprep. There are going to be some bugs in the pybids BIDSReport module in...

That makes sense. If the acquisition report generation is going to be integrated, then it's probably worth it to move to 0.7.1 (or whatever comes next) directly, since 0.7 missed...

I think I'm ready to open a PR, but the BIDSReport write-ups are still pretty ugly. Here is an example writeup for [ds000254](https://openneuro.org/datasets/ds000254/versions/00002) (just what I had on hand): >For...

I just wanted to ping this issue. Should I open a pull request or wait on further improvements to pybids' BIDSReport?

I believe that a relatively simple solution would be to build the BIDSReport in `fmriprep.workflows.base.init_fmriprep_wf()`, like [this](https://github.com/tsalo/fmriprep/blob/7edae166d7d80f3e960a1c1082a69170cd1bb3f0/fmriprep/workflows/base.py#L52-L72). That said, I think it should also be pretty easy to add a...

@oesteban I'm not really familiar with the reportlets. However, my assumption was that the image acquisition section would end up within the preprocessing section of the report, but before the...

Oh okay. So would the goal be to index the reportlets as is done there and then to use those to build image-specific acquisition boilerplates that describe the original file?...

Here's an example meta-regression summary from metafor: ```Text Random-Effects Model (k = 13; tau^2 estimator: EB) tau^2 (estimated amount of total heterogeneity): 0.2682 (SE = 0.1801) tau (square root of...

Here's the result of a first pass at the summary: ```Text Random-Effects Model (k = 12; tau^2 estimator: DerSimonianLaird) tau^2 (estimated amount of total heterogeneity): 0.0067 (SE = n/a) tau...