InMemoryJavaCompiler
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compiler does not find the NetcdfFileWriter identifiers
I would like to convert String variables to java code to build a NetCDF file from strings. I have some Strings which contain the commands to write a netCDF. For example:
String Variable contains the following strings: 'Variable time; ' 'time = ncfile.addVariable(null, "time", DataType.Double, "time");'
String DataA contains: 'ArrayDouble.D1 timeData = new ArrayDouble.D1(countLinesResult); ' 'Index ima = timeData.getIndex();'
String DataD contains: 'timeData.setDouble(ima.set(timeIdx),ValueD.get(timeIdx)); '
String DataNC contains: 'ncfile.write(time, timeData); '
each string is public static String. These strings are in NetCDF_writer Class static void getDataNc method. Here is the code:
package meteoread;
/**
*
* @author Beata
*/
;
import java.sql.Connection;
import java.sql.PreparedStatement;
import java.sql.ResultSet;
import java.sql.ResultSetMetaData;
import java.text.ParseException;
import java.text.SimpleDateFormat;
import java.util.ArrayList;
import java.util.Calendar;
import java.util.Date;
import java.util.GregorianCalendar;
import java.util.Iterator;
import static meteoread.DownLoad_Meteo.Detected;
import static meteoread.DownLoad_Meteo.ETime;
import static meteoread.DownLoad_Meteo.STime;
import static meteoread.DownLoad_Meteo.Values;
import static meteoread.DownLoad_Meteo.Values2;
import static meteoread.DownLoad_Meteo.id1;
import static meteoread.DownLoad_Meteo.id2;
import static meteoread.DownLoad_Meteo.listString;
import static meteoread.DownLoad_Meteo.res;
import static meteoread.SelectData.result;
import org.mdkt.compiler.InMemoryJavaCompiler;
import ucar.nc2.*;
import ucar.ma2.*;
public class NetCDF_writer {
private static String okW ="";
private static int is;
private static int il;
private static int di;
private static int countLinesResult;
public static String TableNC = DownLoad_Meteo.Table;
private static ArrayList<String> s = new ArrayList<String>();
private static ArrayList<String> s2 = new ArrayList<String>();
private static ArrayList<String> s3 = new ArrayList<String>();
private static ArrayList<String> s4 = new ArrayList<String>();
private static ArrayList<String> s5 = new ArrayList<String>();
private String[] colName;
private static ArrayList<String> ValueS = new ArrayList<String>();
private static ArrayList<Integer> ValueI = new ArrayList<Integer>();
private static ArrayList<Double> ValueD = new ArrayList<Double>();
public static String Variables;
public static String DataA;
public static String DataD;
public static String DataNC;
static void getDataNc(int id1, int id2, String listString, String location, String Stimenc, String ETimenc)throws Exception {
try{
Connection con = MeteoRead.getConnection();
PreparedStatement statement= con.prepareStatement("SELECT " + listString + " FROM " +TableNC + " WHERE TIME_ID BETWEEN " +"\"" + STime + "\"" +" AND " + "\"" +ETime + "\"" + " ORDER BY ID");
ResultSet result = statement.executeQuery();
ResultSetMetaData rsmd = result.getMetaData();
is = id1;
il = id2;
di = il-is;
if(is == 1){
countLinesResult = il;
}
else{
countLinesResult = di;}
result.first();
result.previous();
ColName = listString.split(",");
NetcdfFileWriter ncfile = NetcdfFileWriter.createNew(NetcdfFileWriter.Version.netcdf4, location, null);
Dimension timeDim = ncfile.addUnlimitedDimension("time");
s = SelectData.result.get(1);
s2 = SelectData.result.get(2);
s3 = SelectData.result.get(3);
s4 = SelectData.result.get(4);
s5 = SelectData.result.get(5);
Variables = "";
DataA = "";
DataD = "";
DataNC = "";
int n = 0;
while(n < s.size()-1){
Variables = Variables +" " + s.get(n) + "\n";
Variables = Variables +" " + s2.get(n) + "\n";
while(result.next()){
Date date2 = dateConv1(result.getString("TIME"));
double dateU = ToMATLABDate(date2);
if(rsmd.getColumnName(n+1).equals("TIME")){
ValueD.add(dateU);
}
if(rsmd.getColumnTypeName(n+1)== "VARCHAR" && !rsmd.getColumnName(n+1).equals("TIME")){
ValueS.add(result.getString(ColName[n]));
}
if(rsmd.getColumnTypeName(n+1)== "INTEGER"){
ValueI.add(result.getInt(ColName[n]));
}
if(rsmd.getColumnTypeName(n+1)== "DOUBLE"){
ValueD.add(result.getDouble(ColName[n]));
}
}
DataA = DataA + s3.get(n) + "\n";
DataD = DataD + s4.get(n) + "\n";
DataNC = DataNC + s5.get(n) + "\n";
n++; }
StringBuffer sourceCode = new StringBuffer();
sourceCode.append("package meteoread;\n");
sourceCode.append("public class NetCDF_writer {\n");
sourceCode.append(" static void getDataNc(int id1, int id2, String listString, String location, String Stimenc, String ETimenc)throws Exception {" +Variables +" ncfile.create();" + "\n" + DataA +" for (int timeIdx = 0; timeIdx < countLinesResult; timeIdx ++){" + DataD + "}"+ DataNC + "}");
sourceCode.append("}");
Class<?> Netcdf_writer = InMemoryJavaCompiler.compile("meteoread.NetCDF_writer", sourceCode.toString());
okW = "NC FILE BUILD SUCCESSFULLY";
okWindow o = new okWindow();
o.okWindow(okW);
o.setVisible(true);
} catch(Exception e){
e.printStackTrace();
okW = e.toString();
okWindow o = new okWindow();
o.okWindow(okW);
o.setVisible(true);}
}
public static Date dateConv1(String s){
SimpleDateFormat formatter = new SimpleDateFormat("yyyy-MM-dd HH:mm:ss");
String dateInString = s;
Date date = new Date();
try {
date = (Date)formatter.parse(dateInString);
} catch (ParseException e) {
e.printStackTrace();
}
return date;
}
/**
* Converts a java.util.Date into a MATLAB Serial Date Number in the local timezone. MATLAB Serial Date Number are
* doubles counting the number of days since January 0 0000. The time of day is represented in fractions of a whole
* day.
*
* @param date the date to convert
* @return the date as MATLAB Serial Date Number
*/
public static double ToMATLABDate(Date date) {
// Converts a java.util.Date into a MATLAB Serial Date Number taking into account timezones and DST.
Calendar cal = new GregorianCalendar();
cal.setTime(date);
double SerialDateNumber = (date.getTime() + cal.get(Calendar.ZONE_OFFSET) + cal.get(Calendar.DST_OFFSET)) / 1000.0 / 3600.0 / 24.0 ;
return SerialDateNumber;
}
}
Unfortunately, I got several cannot find symbol error messages. The compiler does not find the NetcdfFileWriter identifiers even though I imported ucar.nc2.* and ucar.ma2.* packages. Could you please write to me how I should fix this issue?
