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BUG: p-Vales are not adjusted by "fdr_bh" but "bonf" works

Open SimonE1220 opened this issue 5 months ago • 2 comments

Dea all, I am running version 0.6.0 and also tried the newest version. However, if I pass the p-Value correction by fdr_bh it retunrs always the uncorrected values. If I pass bonf it corrects the p-Vales accrodingly.

Best, Simon

SimonE1220 avatar Jul 30 '25 09:07 SimonE1220

Hello @SimonE1220 ,

Can you please check if your answer isn't in #99 (or referenced discussion)?

trevismd avatar Aug 02 '25 11:08 trevismd

Thank you very much. I saw the discussion. I am new to python and programming. Is it possible to show the adjusted p-values in the plots for the BH correction ? Or could you explain why the raw p-values are shown if I use BH correction but not Bonf.

Thank you very much.

SimonE1220 avatar Aug 03 '25 07:08 SimonE1220