statannotations Stannotation with scanpy and seaborn

Hello,

I am trying to add statistical annotation on a boxplot I generated with scanpy but I get those errors :

ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. scanpy 1.10.2 requires seaborn>=0.13, but you have seaborn 0.11.2 which is incompatible.

So I upgraded seaborn

ERROR: pip's dependency resolver does not currently take into account all the packages that are installed. This behaviour is the source of the following dependency conflicts. statannotations 0.6.0 requires seaborn<0.12,>=0.9.0, but you have seaborn 0.13.0 which is incompatible.

How do I solve that ?

Best regards,

Lionel Lenoir

Jul 30 '24 07:07 LioLenr

Currently the package is not compatible with Seaborn 0.13, but efforts are being made. See: https://github.com/trevismd/statannotations/pull/155

Aug 04 '24 11:08 simbru

Closing this as should be solved with v0.7+ (or workarounds found). Please let us know if some problems persist.

Dec 02 '24 07:12 trevismd